Details of SCOP family a.4.5.28

SCOP class : All alpha proteins

SCOP fold : DNA/RNA-binding 3-helical bundle

SCOP superfamily : "Winged helix" DNA-binding domain

SCOP family : MarR-like transcriptional regulators

Click here to go to SCOP page for this family


Pfam families related to this family

Z score family code family description
10.434 B-block_TFIIICB-block binding subunit of TFIIIC
8.115 CrpBacterial regulatory proteins, crp family
7.774 DUF1495Winged helix DNA-binding domain (DUF1495)
9.020 DUF2250Uncharacterized protein conserved in archaea (DUF2250)
8.503 DUF2513Hypothetical protein (DUF2513)
8.277 DUF3116Protein of unknown function (DUF3116)
8.666 DUF4364Domain of unknown function (DUF4364)
11.205 Fe_dep_repressIron dependent repressor, N-terminal DNA binding domain
7.587 FeoCFeoC like transcriptional regulator
8.210 GntRBacterial regulatory proteins, gntR family
10.401 HTH_1Bacterial regulatory helix-turn-helix protein, lysR family
7.993 HTH_10HTH DNA binding domain
8.750 HTH_11HTH domain
9.471 HTH_12Ribonuclease R winged-helix domain
13.218 HTH_20Helix-turn-helix domain
12.997 HTH_24Winged helix-turn-helix DNA-binding
17.682 HTH_27Winged helix DNA-binding domain
14.727 HTH_34Winged helix DNA-binding domain
9.433 HTH_36Helix-turn-helix domain
9.852 HTH_45Winged helix-turn-helix
13.199 HTH_5Bacterial regulatory protein, arsR family
8.081 HTH_AsnC-typeAsnC-type helix-turn-helix domain
7.916 HTH_CodYCodY helix-turn-helix domain
10.560 HTH_Crp_2Crp-like helix-turn-helix domain
7.922 HTH_DeoRDeoR-like helix-turn-helix domain
12.023 HTH_IclRIclR helix-turn-helix domain
7.865 HrcA_DNA-bdgWinged helix-turn-helix transcription repressor, HrcA DNA-binding
12.513 HxlRHxlR-like helix-turn-helix
10.353 LexA_DNA_bindLexA DNA binding domain
20.672 MarRMarR family
21.849 MarR_2MarR family
7.810 Mrr_NMrr N-terminal domain
8.395 PaaXPaaX-like protein
14.025 PadRTranscriptional regulator PadR-like family
9.802 Penicillinase_RPenicillinase repressor
12.411 RP-CReplication protein C N-terminal domain
9.647 Rio2_NRio2, N-terminal
10.037 Rrf2Transcriptional regulator
7.961 RuvB_CHolliday junction DNA helicase ruvB C-terminus
9.482 SgrR_NSugar transport-related sRNA regulator N-term
8.531 Sulfolobus_pRNSulfolobus plasmid regulatory protein
9.148 TFIIE_alphaTFIIE alpha subunit
13.741 TrmBSugar-specific transcriptional regulator TrmB