Details of SCOP family a.4.5.4

SCOP class : All alpha proteins

SCOP fold : DNA/RNA-binding 3-helical bundle

SCOP superfamily : "Winged helix" DNA-binding domain

SCOP family : CAP C-terminal domain-like

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Pfam families related to this family

Z score family code family description
7.567 Arg_repressorArginine repressor, DNA binding domain
7.728 B-block_TFIIICB-block binding subunit of TFIIIC
7.690 Cdc6_CCDC6, C terminal
7.580 CrpBacterial regulatory proteins, crp family
7.764 DUF1495Winged helix DNA-binding domain (DUF1495)
9.583 DUF2250Uncharacterized protein conserved in archaea (DUF2250)
8.518 DUF2513Hypothetical protein (DUF2513)
8.380 DUF2551Protein of unknown function (DUF2551)
9.714 DUF3116Protein of unknown function (DUF3116)
10.206 DUF4364Domain of unknown function (DUF4364)
26.930 DsrDDissimilatory sulfite reductase D (DsrD)
10.699 FURFerric uptake regulator family
8.193 FaeAFaeA-like protein
7.637 Fe_dep_repressIron dependent repressor, N-terminal DNA binding domain
8.489 GntRBacterial regulatory proteins, gntR family
12.083 HTH_1Bacterial regulatory helix-turn-helix protein, lysR family
7.662 HTH_11HTH domain
8.043 HTH_12Ribonuclease R winged-helix domain
9.787 HTH_20Helix-turn-helix domain
8.044 HTH_24Winged helix-turn-helix DNA-binding
7.527 HTH_27Winged helix DNA-binding domain
12.511 HTH_34Winged helix DNA-binding domain
7.579 HTH_36Helix-turn-helix domain
9.239 HTH_45Winged helix-turn-helix
8.294 HTH_5Bacterial regulatory protein, arsR family
9.635 HTH_9RNA polymerase III subunit RPC82 helix-turn-helix domain
8.161 HTH_CodYCodY helix-turn-helix domain
7.563 HTH_Crp_2Crp-like helix-turn-helix domain
7.511 HTH_DeoRDeoR-like helix-turn-helix domain
7.780 HTH_IclRIclR helix-turn-helix domain
8.191 HemN_CHemN C-terminal domain
8.149 HrcA_DNA-bdgWinged helix-turn-helix transcription repressor, HrcA DNA-binding
11.189 HxlRHxlR-like helix-turn-helix
10.166 IBDTranscription-initiator DNA-binding domain IBD
23.758 LaLa domain
8.063 LexA_DNA_bindLexA DNA binding domain
8.081 MarRMarR family
7.807 MarR_2MarR family
9.604 Mrr_NMrr N-terminal domain
9.265 PaaXPaaX-like protein
9.739 PadRTranscriptional regulator PadR-like family
7.911 Penicillinase_RPenicillinase repressor
7.591 Phage_rep_org_NN-terminal phage replisome organiser (Phage_rep_org_N)
26.227 PuR_NBacterial purine repressor, N-terminal
7.506 RP-CReplication protein C N-terminal domain
30.444 RQCRQC domain
7.777 Ribosomal_S19eRibosomal protein S19e
9.244 Rio2_NRio2, N-terminal
7.513 Rrf2Transcriptional regulator
7.546 RuvB_CHolliday junction DNA helicase ruvB C-terminus
7.791 S10_plectinPlectin/S10 domain
7.557 TFIIE_alphaTFIIE alpha subunit
8.712 TrmBSugar-specific transcriptional regulator TrmB