Details of SCOP family a.4.5.4
SCOP class
: All alpha proteins
SCOP fold
: DNA/RNA-binding 3-helical bundle
SCOP superfamily
: "Winged helix" DNA-binding domain
SCOP family
: CAP C-terminal domain-like
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Pfam families related to this family
Z score
family code
family description
7.567
Arg_repressor
Arginine repressor, DNA binding domain
7.728
B-block_TFIIIC
B-block binding subunit of TFIIIC
7.690
Cdc6_C
CDC6, C terminal
7.580
Crp
Bacterial regulatory proteins, crp family
7.764
DUF1495
Winged helix DNA-binding domain (DUF1495)
9.583
DUF2250
Uncharacterized protein conserved in archaea (DUF2250)
8.518
DUF2513
Hypothetical protein (DUF2513)
8.380
DUF2551
Protein of unknown function (DUF2551)
9.714
DUF3116
Protein of unknown function (DUF3116)
10.206
DUF4364
Domain of unknown function (DUF4364)
26.930
DsrD
Dissimilatory sulfite reductase D (DsrD)
10.699
FUR
Ferric uptake regulator family
8.193
FaeA
FaeA-like protein
7.637
Fe_dep_repress
Iron dependent repressor, N-terminal DNA binding domain
8.489
GntR
Bacterial regulatory proteins, gntR family
12.083
HTH_1
Bacterial regulatory helix-turn-helix protein, lysR family
7.662
HTH_11
HTH domain
8.043
HTH_12
Ribonuclease R winged-helix domain
9.787
HTH_20
Helix-turn-helix domain
8.044
HTH_24
Winged helix-turn-helix DNA-binding
7.527
HTH_27
Winged helix DNA-binding domain
12.511
HTH_34
Winged helix DNA-binding domain
7.579
HTH_36
Helix-turn-helix domain
9.239
HTH_45
Winged helix-turn-helix
8.294
HTH_5
Bacterial regulatory protein, arsR family
9.635
HTH_9
RNA polymerase III subunit RPC82 helix-turn-helix domain
8.161
HTH_CodY
CodY helix-turn-helix domain
7.563
HTH_Crp_2
Crp-like helix-turn-helix domain
7.511
HTH_DeoR
DeoR-like helix-turn-helix domain
7.780
HTH_IclR
IclR helix-turn-helix domain
8.191
HemN_C
HemN C-terminal domain
8.149
HrcA_DNA-bdg
Winged helix-turn-helix transcription repressor, HrcA DNA-binding
11.189
HxlR
HxlR-like helix-turn-helix
10.166
IBD
Transcription-initiator DNA-binding domain IBD
23.758
La
La domain
8.063
LexA_DNA_bind
LexA DNA binding domain
8.081
MarR
MarR family
7.807
MarR_2
MarR family
9.604
Mrr_N
Mrr N-terminal domain
9.265
PaaX
PaaX-like protein
9.739
PadR
Transcriptional regulator PadR-like family
7.911
Penicillinase_R
Penicillinase repressor
7.591
Phage_rep_org_N
N-terminal phage replisome organiser (Phage_rep_org_N)
26.227
PuR_N
Bacterial purine repressor, N-terminal
7.506
RP-C
Replication protein C N-terminal domain
30.444
RQC
RQC domain
7.777
Ribosomal_S19e
Ribosomal protein S19e
9.244
Rio2_N
Rio2, N-terminal
7.513
Rrf2
Transcriptional regulator
7.546
RuvB_C
Holliday junction DNA helicase ruvB C-terminus
7.791
S10_plectin
Plectin/S10 domain
7.557
TFIIE_alpha
TFIIE alpha subunit
8.712
TrmB
Sugar-specific transcriptional regulator TrmB