Details of SCOP family a.4.5.50

SCOP class : All alpha proteins

SCOP fold : DNA/RNA-binding 3-helical bundle

SCOP superfamily : "Winged helix" DNA-binding domain

SCOP family : TrmB-like

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Pfam families related to this family

Z score family code family description
10.663 B-block_TFIIICB-block binding subunit of TFIIIC
7.508 Cdc6_CCDC6, C terminal
8.516 CrpBacterial regulatory proteins, crp family
9.229 DUF1495Winged helix DNA-binding domain (DUF1495)
10.160 DUF2250Uncharacterized protein conserved in archaea (DUF2250)
8.511 DUF2513Hypothetical protein (DUF2513)
7.629 DUF3116Protein of unknown function (DUF3116)
8.450 DUF4364Domain of unknown function (DUF4364)
9.267 FURFerric uptake regulator family
9.773 FaeAFaeA-like protein
10.537 Fe_dep_repressIron dependent repressor, N-terminal DNA binding domain
7.909 FeoCFeoC like transcriptional regulator
9.349 GntRBacterial regulatory proteins, gntR family
8.266 HTH_1Bacterial regulatory helix-turn-helix protein, lysR family
9.100 HTH_10HTH DNA binding domain
12.229 HTH_11HTH domain
10.843 HTH_12Ribonuclease R winged-helix domain
15.682 HTH_20Helix-turn-helix domain
15.776 HTH_24Winged helix-turn-helix DNA-binding
15.145 HTH_27Winged helix DNA-binding domain
13.851 HTH_34Winged helix DNA-binding domain
10.176 HTH_36Helix-turn-helix domain
8.760 HTH_39Helix-turn-helix domain
8.203 HTH_41Helix-turn-helix domain
9.807 HTH_45Winged helix-turn-helix
16.983 HTH_5Bacterial regulatory protein, arsR family
7.578 HTH_9RNA polymerase III subunit RPC82 helix-turn-helix domain
10.951 HTH_AsnC-typeAsnC-type helix-turn-helix domain
8.797 HTH_CodYCodY helix-turn-helix domain
10.747 HTH_Crp_2Crp-like helix-turn-helix domain
11.286 HTH_DeoRDeoR-like helix-turn-helix domain
13.321 HTH_IclRIclR helix-turn-helix domain
7.576 HemN_CHemN C-terminal domain
8.688 HrcA_DNA-bdgWinged helix-turn-helix transcription repressor, HrcA DNA-binding
11.442 HxlRHxlR-like helix-turn-helix
10.696 LexA_DNA_bindLexA DNA binding domain
16.648 MarRMarR family
17.960 MarR_2MarR family
8.164 PaaXPaaX-like protein
10.923 PadRTranscriptional regulator PadR-like family
8.127 Penicillinase_RPenicillinase repressor
9.941 RP-CReplication protein C N-terminal domain
8.212 RepLFirmicute plasmid replication protein (RepL)
8.675 Rio2_NRio2, N-terminal
11.295 Rrf2Transcriptional regulator
7.905 SgrR_NSugar transport-related sRNA regulator N-term
9.115 Sulfolobus_pRNSulfolobus plasmid regulatory protein
9.729 TFIIE_alphaTFIIE alpha subunit
14.204 TrmBSugar-specific transcriptional regulator TrmB