Details of Superfamily b.40.4
Diagram of relationships between the families present in b.40.4 Superfamily.
Click on the figure for a larger image.
SCOP class
: All beta proteins
SCOP fold
: OB-fold
SCOP superfamily
: Nucleic acid-binding proteins
Click to Show/Hide SCOP families in this Superfamily
b.40.4.1
: Anticodon-binding domain
b.40.4.10
: Hypothetical protein MTH1 (MT0001), insert domain
b.40.4.11
: DNA replication initiator (cdc21/cdc54) N-terminal domain
b.40.4.12
: TRAM domain
b.40.4.13
: RecO N-terminal domain-like
b.40.4.14
: TIP49 domain
b.40.4.15
: SSO2064-like
b.40.4.16
: RNB domain-like
b.40.4.2
: DNA helicase RuvA subunit, N-terminal domain
b.40.4.3
: Single strand DNA-binding domain, SSB
b.40.4.4
: Myf domain
b.40.4.5
: Cold shock DNA-binding domain-like
b.40.4.6
: DNA ligase/mRNA capping enzyme postcatalytic domain
b.40.4.7
: Phage ssDNA-binding proteins
b.40.4.8
: RNA polymerase subunit RBP8
b.40.4.9
: RecG "wedge" domain
Pfam families present in this Superfamily
DNA_ligase_A_C -- ATP dependent DNA ligase C terminal region (PF04679)
DNA_ligase_OB_2 -- DNA ligase OB-like domain (PF14743)
DUF2815 -- Protein of unknown function (DUF2815) (PF10991)
MCM_N -- MCM N-terminal domain (PF14551)
RNA_pol_Rpb8 -- RNA polymerase Rpb8 (PF03870)
RuvA_N -- RuvA N terminal domain (PF01330)
TRAM -- TRAM domain (PF01938)
tRNA_anti-codon -- OB-fold nucleic acid binding domain (PF01336)
tRNA_anti-like -- tRNA_anti-like (PF12869)
tRNA_anti_2 -- OB-fold nucleic acid binding domain (PF13742)
tRNA_bind -- Putative tRNA binding domain (PF01588)
